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A New Technology Could Help Solve a DNA Mystery

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The human genome’s inner workings could be revealed through new Cornell-developed technology.

Researchers from Oxford Nanopore Technologies, Weill Cornell Medicine, and the New York Genome Center have created a new technique to evaluate the three-dimensional structure of the human DNA, or how the genome folds, on a massive scale. The genome is the entire set of genetic instructions, either DNA or RNA, that allow an organism to function.

Using this technique, the researchers showed that groups of simultaneously interacting regulatory elements in the genome, as opposed to pairs of these elements, may influence cell activity, including gene expression. Their research, which was recently published in the journal Nature Biotechnology, may help clarify the connection between cellular identity and genome structure.

“Knowing the three-dimensional genome structure will help researchers better understand how the genome functions, and particularly how it encodes different cell identities,” said senior author Dr. Marcin Imieliński, associate professor of pathology and laboratory medicine and computational genomics in computational biomedicine at Weill Cornell Medicine and a core member of the New York Genome Center. “The ways that we’ve had to study genome structure have given us amazing insights, but there have also been key limitations,” he said.

For example, previous technology to examine the genome’s three-dimensional structure enabled researchers to investigate how often two loci, or physical sites on the genome, interact with one another. Traditionally, pairs of loci known as enhancers and promoters—components in the genome that interact with one another to control gene expression—have been discovered.

Information about these pairings offers incomplete insight into genome structure and function. For instance, linking a folding pattern to how the genome encodes for a specific cell identity—like a liver, lung, or epithelial cell—has been difficult, said Dr. Imieliński, who is also a member of the Englander Institute for Precision Medicine and the Sandra and Edward Meyer Cancer Center at Weill Cornell Medicine. Scientists have theorized that this folding influences gene expression. “But how cell types are encoded, particularly in the structure of DNA, has been a mystery,” he said.

Dr. Imieliski and his research team, which included first author Aditya Deshpande, a recent graduate of the Tri-Institutional Ph.D. Program in Computational Biology & Medicine who worked in Dr. Imieliski’s lab, created a new genome-wide assay and algorithm that allows them to study groups of loci rather than just pairs.

They adapted Hi-C (chromatin conformation capture), a standard approach that evaluates a combination of DNA and protein to assess three-dimensional genome structure, to nanopore sequencing, or the high-throughput sequencing of long, continuous strands of DNA molecules. The new test, named Pore-C, allowed the researchers to examine tens of millions of three-dimensional locus clusters.

They also developed statistical methods to determine which locus groupings were important, based on whether they interacted cooperatively to affect gene expression. “Many three-dimensional interactions of the genome are not important,” Dr. Imieliński said. “Our analytic methods help us prioritize the group interactions that are likely to matter for genome function.” As a key finding of the study, the researchers found that the most significant cooperative groupings of DNA elements occurred around genes associated with cell identity.

Future experiments will explore which specific groupings of genomic components are essential for various aspects of cell identity. The new technology may also help researchers to understand how stem cells, the immature, master cells of the body, differentiate into different cell types.

In addition, researchers may be better able to understand abnormalities in cancer cells. “In the future, this technology may be really helpful in understanding how cancer cell genomes are rearranged, and how those rearrangements drive the altered cell identities that enable cancers to grow and spread,” Dr. Imieliński said.

Reference: “Identifying synergistic high-order 3D chromatin conformations from genome-scale nanopore concatemer sequencing” by Aditya S. Deshpande, Netha Ulahannan, Matthew Pendleton, Xiaoguang Dai, Lynn Ly, Julie M. Behr, Stefan Schwenk, Will Liao, Michael A. Augello, Carly Tyer, Priyesh Rughani, Sarah Kudman, Huasong Tian, Hannah G. Otis, Emily Adney, David Wilkes, Juan Miguel Mosquera, Christopher E. Barbieri, Ari Melnick, David Stoddart, Daniel J. Turner, Sissel Juul, Eoghan Harrington and Marcin Imieliński, 30 May 2022, Nature Biotechnology.

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Trader Joe’s: A Unique Grocery Shopping Experience

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Trader Joe's: A Unique Grocery Shopping Experience

Discover the unparalleled shopping experience at Trader Joe’s, a renowned grocery store chain offering a wide range of high-quality products at affordable prices. Explore the diverse selection, innovative offerings, and friendly atmosphere that make Trader Joe’s a favorite destination for food enthusiasts.

Introduction: Welcome to Trader Joe’s

Trader Joe’s has revolutionized the grocery shopping industry with its distinctive approach to retail. With a commitment to providing unique and high-quality products, Trader Joe’s has garnered a loyal following of customers who are eager to explore the ever-changing assortment of items on their shelves. In this article, we will delve into the world of Trader Joe’s and explore the reasons why it stands out from the competition.

Trader Joe’s: A Shopper’s Paradise

A Haven for Food Enthusiasts

Trader Joe’s is more than just a grocery store; it’s a paradise for food enthusiasts. With an extensive selection of gourmet and specialty items sourced from around the world, Trader Joe’s caters to the discerning palate. From unique snacks and appetizers to artisanal cheeses and decadent desserts, there’s always something new and exciting to discover at Trader Joe’s.

Unbeatable Prices and Value

One of the hallmarks of Trader Joe’s is its commitment to providing exceptional value to its customers. While the store offers a wide range of high-quality products, it manages to keep its prices affordable. This combination of quality and value is what sets Trader Joe’s apart from its competitors, making it an attractive option for budget-conscious shoppers.

A Neighborhood Vibe

Step into any Trader Joe’s, and you’ll immediately notice the warm and welcoming atmosphere. With friendly staff members who are always ready to assist you, shopping at Trader Joe’s feels like a visit to your neighborhood store. The company prides itself on fostering a sense of community and creating an enjoyable shopping experience for its customers.

Exploring Trader Joe’s Selection

A Cornucopia of Fresh Produce

Trader Joe’s offers an impressive selection of fresh fruits and vegetables, sourced from trusted suppliers. Whether you’re in search of everyday staples or exotic produce, Trader Joe’s has you covered. From crisp apples to vibrant heirloom tomatoes, their produce section boasts a colorful array of options that will inspire any home cook.

Delightful Dairy and Cheese Selection

Cheese lovers rejoice! Trader Joe’s is renowned for its diverse selection of cheeses from around the world. From creamy Brie to tangy blue cheese, you’ll find a range of flavors and textures to suit your taste buds. Pair your favorite cheese with their assortment of crackers and you’re in for a treat.

International Flavors Galore

At Trader Joe’s, you can embark on a global culinary adventure without leaving the store. Their shelves are stocked with a wide variety of international ingredients and products, allowing you to explore different cuisines and expand your culinary horizons. Whether you’re in the mood for Thai curry, Italian pasta, or Indian spices, Trader Joe’s has everything you need to create authentic and flavorful dishes.

Unique and Innovative Offerings

One of the reasons why Trader Joe’s is so beloved is its constant introduction of unique and innovative products. The store takes pride in being a trendsetter in the grocery industry, and customers eagerly anticipate the arrival of new items. From seasonal treats to unexpected flavor combinations, Trader Joe’s never fails to surprise and delight its customers.

Frequently Asked Questions (FAQs)

1. What makes Trader Joe’s different from other grocery stores?

Trader Joe’s stands out from other grocery stores due to its unique selection of products, unbeatable prices, and friendly atmosphere. The store offers an exciting array of gourmet and specialty items, all at affordable prices,making it a destination for food enthusiasts. Additionally, Trader Joe’s prides itself on creating a neighborhood vibe with its welcoming staff and sense of community.

2. Does Trader Joe’s offer organic and healthy options?

Yes, Trader Joe’s is known for its commitment to offering a wide range of organic and healthy options. The store carries a variety of organic produce, as well as organic dairy products, meats, and pantry staples. In addition, Trader Joe’s has a selection of gluten-free, vegan, and vegetarian products to cater to different dietary preferences and needs.

3. Are Trader Joe’s products affordable compared to other grocery stores?

Yes, Trader Joe’s is renowned for its affordability. While providing high-quality products, Trader Joe’s manages to keep its prices competitive. This combination of quality and value makes it an attractive choice for shoppers looking to get the most out of their budget.

4. Can I find international ingredients and spices at Trader Joe’s?

Absolutely! Trader Joe’s takes pride in offering a diverse range of international ingredients and spices. Whether you’re looking for exotic spices for a specific recipe or unique international snacks, Trader Joe’s has a selection that will satisfy your culinary cravings.

5. Are there any Trader Joe’s branded products?

Yes, Trader Joe’s has its own line of branded products. These Trader Joe’s branded items are carefully curated and developed to meet the company’s high standards for quality and taste. From snacks and pantry staples to frozen meals and beverages, you’ll find a variety of Trader Joe’s branded products throughout the store.

6. Does Trader Joe’s have a return policy?

Yes, Trader Joe’s has a customer-friendly return policy. If you’re not satisfied with a product you’ve purchased, you can return it to the store with a receipt for a full refund. Trader Joe’s aims to ensure customer satisfaction and stands behind the quality of their products.

Conclusion: A Shopping Experience Like No Other

Trader Joe’s offers a shopping experience that is truly unique. With its diverse and high-quality product selection, unbeatable prices, and friendly atmosphere, it has become a favorite destination for food enthusiasts and budget-conscious shoppers alike. Whether you’re searching for everyday essentials, international ingredients, or innovative snacks, Trader Joe’s has something to offer. So, the next time you’re in search of a grocery store adventure, don’t miss out on the vibrant and exciting world of Trader Joe’s.

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Rebbe’s Dollar distribution

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Rebbe's Dollar distribution

Uncover the extraordinary story of the Rebbe’s Dollar distribution, a powerful tradition that has transformed lives and inspired acts of kindness across the globe.

The Rebbe’s one-dollar bill, a symbol of charity and compassion, continues to embody the spiritual legacy of Rabbi Menachem Mendel Schneerson, inspiring countless individuals to embrace a life of giving and kindness.

Every Sunday, people from all walks of life – Jews and non-Jews alike – would line up outside the Rebbe’s residence at 770 Eastern Parkway in Brooklyn, New York, eager to receive a dollar bill and a blessing from the Rebbe.

It was a testament to the universal nature of the Rebbe’s message of love, kindness, and the power of good deeds.

The Rebbe would hand out dollar bills to each individual, instructing them to donate the money to a charity of their choice. Through this small act of giving, the Rebbe instilled the value of charity and the potential of a single dollar to create positive change.

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Sustainable Diamonds – What You Need to Know About Lab-Grown Diamonds in NZ

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Sustainable Diamonds - What You Need to Know About Lab-Grown Diamonds in NZ

The use of lab grown diamonds NZ in jewellery has been growing rapidly over the last few years. This is because they are eco-friendly, and they cost less than mined diamonds. However, it is essential to understand the differences between a lab-grown and a mined diamond before making a purchase decision.

A Lab-Grown Diamond is a synthetic diamond created by humans in a lab instead of being mined from the ground. They are similar to natural diamonds in almost every way, except that they do not cloud or lose their luster over time.

There are several processes that can be used to grow a diamond in a lab, but the most common ones are High Pressure-High Temperature (HPHT) and Chemical Vapor Deposition (CVD). These methods are incredibly complex, but they have the same end goal: to replicate the conditions that naturally occur when a diamond grows on the earth’s surface.

Unlike mined diamonds, formed after millions of years of exposure to extreme heat and temperatures within the earth’s crust, lab-grown diamonds are created by scientists in a controlled environment. This allows them to mimic the same physical and chemical properties of natural diamonds, while also being significantly cheaper and environmentally friendly.

How They’re Made

When a diamond seed is placed inside of a sealed chamber, it is pressurized and heated until the carbon particles break down and crystallize into a fully grown diamond. This process is called growing a diamond in a lab, and many companies have done it since the 1960s.

In addition to being more sustainable, lab-grown diamonds are more ethical than mined diamonds because they don’t heavily impact the environment. For example, a study by Frost & Sullivan found that for each carat of diamonds mined using traditional methods, nearly 100 square feet of land is disturbed and more than 5,798 pounds of mineral waste are created.

Another great thing about lab-grown diamonds is that they don’t consume as much water in the making process. This is because the processes involved in creating a mined diamond require significant amounts of water, and they also create a lot of pollution.

This can lead to many issues, including depleted water supplies and environmental calamities. In addition, the soil can be destroyed, and in turn, the land is rendered unusable once mining operations have ceased.

It is also worth noting that lab-grown diamonds don’t contribute to global warming like mined diamonds, as their carbon is sourced from CO2 emissions. This is a very good thing for the planet, and it is one of the major reasons why people are switching to lab-grown diamonds instead of mined diamonds.

If you want to buy a piece of jewellery with a lab-grown diamond, you’ll need to do some research and make sure that you are getting a good deal on the product. You can do this by checking out prices at different retailers and comparing the costs. You can then choose which option is best for you and your budget.

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